Tuesday, June 18, 2013

Rett Syndrome protein surrenders some of its secrets

June 17, 2013 ? Discovery of a mutant gene responsible for a disease is a milestone, but for most conditions, it may be only a first step towards a treatment or cure. Understanding Rett Syndrome, an autism spectrum disorder, is further complicated by the fact that the implicated gene controls a suite of other genes. Two papers, published in today's Nature Neuroscience and Nature, reveal key steps in how mutations in the gene for methyl CpG-binding protein (MECP2) cause the condition. The Rett Syndrome Research Trust (RSRT) funded this work with generous support from partners Rett Syndrome Research Trust UK and Rett Syndrome Research & Treatment Foundation.

Rett Syndrome is a single-gene neurological disorder that affects girls. Development slows during the first year of life, then regresses, as toddlers lose speech, mobility, and hand use. Many girls have seizures, orthopedic and severe digestive problems, as well as breathing and other autonomic impairments. Most live into adulthood and require total, round-the-clock care. Rett Syndrome affects about 1 in 10,000 girls born each year.

The papers result from a collaboration between the labs of Adrian Bird, Ph.D., Buchanan Professor of Genetics at the Wellcome Trust Centre for Cell Biology at the University of Edinburgh, and Michael Greenberg, Ph.D., Department Chair and Nathan Marsh Pusey Professor of Neurobiology at Harvard Medical School.

The Bird and Greenberg labs have been working together since 2011 as members of the MECP2 Consortium along with Gail Mandel, a Howard Hughes Investigator at Oregon Health and Sciences University. The Consortium, launched by RSRT with a $1 million lead gift by RSRT Trustee Tony Schoener and his wife Kathy, fosters novel alliances among leading scientists to interrogate the molecules at the root of the syndrome.

Professor Bird discovered the MeCP2 protein in 1992. In 2007, he showed that affected brain cells in a mouse model of Rett Syndrome can regain function, even in late stages of the disease, suggesting that the disorder is curable. Despite this unexpected breakthrough the function of the Rett protein remains elusive.

In search of the function, the Bird lab set out to identify the key domains of the protein. Mutations found in individuals suffering from Rett led them to their answer. By focusing only on "missense" mutations, which alter a single amino acid, the researchers were able to hone in on two key domains where the mutations aggregated. The first was the well-known methyl binding domain (MBD) which is the site where MeCP2 binds to methylated DNA, thereby modulating the expression of downstream genes. The second key domain is where MeCP2 binds to a molecule called NCoR/SMRT, a large multi-protein machine that shuts down genes. The Bird lab coined this domain the NCoR/SMRT Interaction Domain (NID).

"Further proof of the importance of the MBD and the NID came from mining the genomes of 6503 healthy people. The result was the exact mirror image of the situation seen in Rett. All along the MECP2 gene normal people have non-disease causing alterations, known as polymorphisms. However, no alterations of any kind could be found in the MBD and the NID, indicating that these domains are prized real estate that cannot be tampered with," said Matthew Lyst, postdoctoral researcher and lead author on the Nature Neuroscience paper.

The most frequent Rett mutation in the NID is at amino acid # 306. When the researchers recapitulated the mutation in mice, the animals suffered symptoms similar to girls with Rett. At fault: loss of the interaction between the MeCP2 and NCoR/SMRT proteins and further evidence of the importance of the NID.

"We knew that MeCP2 binds to the genome at methylated sites, but nothing more than that. We now know that its function depends on the ability to bring NCoR/SMRT co-repressors to the DNA," Prof. Bird summed up.

The Nature paper continues the story through another amino acid location, 308, which is very near the 306 mutation in the human version of the gene. Sensory input leads to the addition of a phosphate group at the 308 site and this alters the ability of the MeCP2 protein to interact with the NCoR/SMRT co-repressor, thereby affecting the expression of downstream proteins. The Greenberg lab created mice with a mutation at 308 that are unable to attach a phosphate group. As a result, genes that MeCP2 normally controls are mis-regulated.

"The MeCP2 308 mice have reduced brain weight, motor system abnormalities, and lower seizure thresholds that correspond to the deceleration of head growth, motor system impairments and seizure disorders found in Rett. This suggests that the modification of 308 is critical for the normal function of MeCP2 and its disruption might contribute to Rett," said Daniel Ebert, postdoctoral researcher and lead author on the Nature paper.

Whether the phosphates are added to MeCP2 depends on activity of the neuron. The Greenberg lab has found that in early life, sensory input leads to modification of MeCP2 at multiple sites, including 308. These changes appear to be critical for proper brain development, and their absence in Rett Syndrome may begin to explain what goes wrong in the brains of girls with this devastating disorder.

Each step deciphered in the genetic choreography behind Rett Syndrome is a step towards treatment. "To design an effective small molecule therapy, one needs to understand the underlying mechanisms of how MeCP2 functions and how mutations in MeCP2 lead to disease. Both papers published today make significant progress by providing compelling evidence for dysregulation of the MeCP2-NCoR interaction underlying key aspects of Rett Syndrome," said Prof. Greenberg.

What still isn't known is which genes the co-repressors target. And that will be the next leap in traveling the road from a mutant gene to a little girl who wrings her hands, has seizures and can't talk or walk. Discovering the other molecular events might reveal intersecting or redundant genetic pathways that drug developers can tweak in the search for treatments.

Source: http://feeds.sciencedaily.com/~r/sciencedaily/most_popular/~3/ohn4IuWHhU8/130617122506.htm

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President Obama: NSA Spying Keeps America Safe, So Get Over It

President Obama: NSA Spying Keeps America Safe, So Get Over It

President Obama will be on Charlie Rose tonight to chat about all the NSA spying that came to light last week. But ahead of the broadcast, PBS has released a portion of the transcript to Buzzfeed. Below is a portion of said transcript:

Read more...

    


Source: http://feeds.gawker.com/~r/gizmodo/full/~3/5pP5STtD3r8/president-obama-nsa-spying-keeps-america-safe-so-get-513894610

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Tuesday, June 11, 2013

After Closing $3 Million Series A, Qwaya Wants To Help SMEs Get Down With Facebook Ads

qwaya-42It's often said that if you're not on Facebook you don't exist, so dominant in our social lives has the uber-social network become. Therefore, it wouldn't be surprising to learn that businesses -- big and small -- may feel the same way. Hoping to cash in on the rise of Facebook advertising is Stockholm-based Qwaya, which offers a cloud-based tool for SMEs to create, publish and measure the effectiveness of Facebook ad campaigns.

Source: http://feedproxy.google.com/~r/Techcrunch/~3/3TbMWLx_rhg/

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Source's employer: Reports of NSA leak 'shocking'

A sign stands outside the National Security Administration (NSA) campus in Fort Meade, Md., Thursday, June 6, 2013. The Obama administration on Thursday defended the National Security Agency's need to collect telephone records of U.S. citizens, calling such information "a critical tool in protecting the nation from terrorist threats." (AP Photo/Patrick Semansky)

A sign stands outside the National Security Administration (NSA) campus in Fort Meade, Md., Thursday, June 6, 2013. The Obama administration on Thursday defended the National Security Agency's need to collect telephone records of U.S. citizens, calling such information "a critical tool in protecting the nation from terrorist threats." (AP Photo/Patrick Semansky)

(AP) ? The employer of a 29-year-old man who says he is behind the leaks of sensitive National Security Agency programs is calling the disclosure "shocking" and is pledging to work with authorities.

Consulting giant Booz Allen on Sunday confirmed Edward Snowden is an employee assigned to a team in Hawaii. The firm says Snowden has been working there less than three months.

The Guardian identified Snowden as a source for its reports on intelligence programs after he asked the newspaper to do so. The Washington Post also identified Snowden as a source for its reporting.

The Guardian says Snowden is a former CIA covert employee and has been an NSA contract employee for four years.

Associated Press

Source: http://hosted2.ap.org/APDEFAULT/89ae8247abe8493fae24405546e9a1aa/Article_2013-06-09-NSA-Phone%20Records-Employer/id-3a349c4261124213bbff03cf522981bb

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Experts find epigenetic changes moderate reality distortion in schizophrenia patients

Experts find epigenetic changes moderate reality distortion in schizophrenia patients [ Back to EurekAlert! ] Public release date: 10-Jun-2013
[ | E-mail | Share Share ]

Contact: Alana Podolsky
alana.podolsky@oup.com
212-726-6033
Oxford University Press

A study in Schizophrenia Bulletin is among the first to indicate epigenetic changes related to immune function in schizophrenia. DNA methylation, a process involving the addition of a methyl group to the DNA without changing its sequence, can alter gene expression. Led by Dr. Jingyu Liu, the nine researchers analyzed and verified changes in DNA methylation patterns in people with and without schizophrenia and found significant changes in seven genes that moderate immune responses.

In the current study, the researchers found that the seven genes that were up or down regulated protect against the delusion and hallucination symptoms in schizophrenia patients. This finding suggests that methylation changes related to immune function may be one of the pathways to moderate symptoms in schizophrenia patients.

###

The paper "Methylation Patterns in Whole Blood Correlate With Symptoms in Schizophrenia Patients" can be accessed here: http://www.oxfordjournals.org/page/5147/6

Media queries and interview requests should be directed to:

Alana Podolsky | Publicity | alana.podolsky@oup.com | 212-726-6033

Schizophrenia Bulletin, published by Oxford University Press, seeks to review recent developments and empirically based hypotheses regarding the etiology and treatment of schizophrenia.


[ Back to EurekAlert! ] [ | E-mail | Share Share ]

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AAAS and EurekAlert! are not responsible for the accuracy of news releases posted to EurekAlert! by contributing institutions or for the use of any information through the EurekAlert! system.


Experts find epigenetic changes moderate reality distortion in schizophrenia patients [ Back to EurekAlert! ] Public release date: 10-Jun-2013
[ | E-mail | Share Share ]

Contact: Alana Podolsky
alana.podolsky@oup.com
212-726-6033
Oxford University Press

A study in Schizophrenia Bulletin is among the first to indicate epigenetic changes related to immune function in schizophrenia. DNA methylation, a process involving the addition of a methyl group to the DNA without changing its sequence, can alter gene expression. Led by Dr. Jingyu Liu, the nine researchers analyzed and verified changes in DNA methylation patterns in people with and without schizophrenia and found significant changes in seven genes that moderate immune responses.

In the current study, the researchers found that the seven genes that were up or down regulated protect against the delusion and hallucination symptoms in schizophrenia patients. This finding suggests that methylation changes related to immune function may be one of the pathways to moderate symptoms in schizophrenia patients.

###

The paper "Methylation Patterns in Whole Blood Correlate With Symptoms in Schizophrenia Patients" can be accessed here: http://www.oxfordjournals.org/page/5147/6

Media queries and interview requests should be directed to:

Alana Podolsky | Publicity | alana.podolsky@oup.com | 212-726-6033

Schizophrenia Bulletin, published by Oxford University Press, seeks to review recent developments and empirically based hypotheses regarding the etiology and treatment of schizophrenia.


[ Back to EurekAlert! ] [ | E-mail | Share Share ]

?


AAAS and EurekAlert! are not responsible for the accuracy of news releases posted to EurekAlert! by contributing institutions or for the use of any information through the EurekAlert! system.


Source: http://www.eurekalert.org/pub_releases/2013-06/oup-efe061013.php

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Martian clay contains chemical implicated in the origin of life, astrobiologists find

June 10, 2013 ? Researchers from the University of Hawaii at Manoa NASA Astrobiology Institute (UHNAI) have discovered high concentrations of boron in a Martian meteorite. When present in its oxidized form (borate), boron may have played a key role in the formation of RNA, one of the building blocks for life.

The work was published on June 6 in PLOS ONE.

The Antarctic Search for Meteorites team found the Martian meteorite used in this study in Antarctica during its 2009-2010 field season. The minerals it contains, as well as its chemical composition, clearly show that it is of Martian origin.

Using the ion microprobe in the W. M. Keck Cosmochemistry Laboratory at UH, the team was able to analyze veins of Martian clay in the meteorite. After ruling out contamination from Earth, they determined boron abundances in these clays are over ten times higher than in any previously measured meteorite.

"Borates may have been important for the origin of life on Earth because they can stabilize ribose, a crucial component of RNA. In early life RNA is thought to have been the informational precursor to DNA," said James Stephenson, a UHNAI postdoctoral fellow.

RNA may have been the first molecule to store information and pass it on to the next generation, a mechanism crucial for evolution. Although life has now evolved a sophisticated mechanism to synthesize RNA, the first RNA molecules must have been made without such help. One of the most difficult steps in making RNA nonbiologically is the formation of the RNA sugar component, ribose. Previous laboratory tests have shown that without borate the chemicals available on the early Earth fail to build ribose. However, in the presence of borate, ribose is spontaneously produced and stabilized.

This work was born from the uniquely interdisciplinary environment of UHNAI. The lead authors on the paper, Stephenson, an evolutionary biologist, and Lydia Hallis, a cosmochemist who is also a UHNAI postdoctoral fellow, first came up with the idea over an after-work beer. "Given that boron has been implicated in the emergence of life, I had assumed that it was well characterized in meteorites," said Stephenson. "Discussing this with Dr. Hallis, I found out that it was barely studied. I was shocked and excited. She then informed me that both the samples and the specialized machinery needed to analyze them were available at UH."

On our planet, borate-enriched salt, sediment and clay deposits are relatively common, but such deposits had never previously been found on an extraterrestrial body. This new research suggests that when life was getting started on Earth, borate could also have been concentrated in deposits on Mars.

The significance goes beyond an interest in the red planet, as Hallis explains: "Earth and Mars used to have much more in common than they do today. Over time, Mars has lost a lot of its atmosphere and surface water, but ancient meteorites preserve delicate clays from wetter periods in Mars' history. The Martian clay we studied is thought to be up to 700 million years old. The recycling of the Earth's crust via plate tectonics has left no evidence of clays this old on our planet; hence Martian clays could provide essential information regarding environmental conditions on the early Earth."

The presence of ancient borate-enriched clays on Mars implies that these clays may also have been present on the early Earth. Borate-enriched clays such as the ones studied here may have represented chemical havens in which one of life's key molecular building blocks could form.

UHNAI is a research center that links the biological, chemical, geological, and astronomical sciences to better understand the origin, history, distribution, and role of water as it relates to life in the universe.

Source: http://feeds.sciencedaily.com/~r/sciencedaily/~3/Hus74qjPe3I/130610220132.htm

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Monday, June 10, 2013

Gale, The Library of Michigan and CIVICTechnologies Partner to ...

Funding Made Possible as Part of the Governor?s ?Economic Gardening? Initiative

Farmington Hills, Mich., June 10, 2013 ? Gale, part of Cengage Learning and a leading publisher of research and reference resources for libraries, schools and businesses, the Library of Michigan and CIVICTechnologies, a leading provider of market research and analytics software for libraries and businesses, today announced a partnership to make business resources available at no cost to local Michigan business owners and entrepreneurs. Following a request for proposals process, the Library of Michigan selected Gale to provide business resources, including a range of ebooks, forms and research databases, and CIVICTechnologies to provide business market research data and software. The services have been purchased through funding allocated in the budget of Michigan Governor Rick Snyder as part of his ?Economic Gardening? initiative to grow businesses in the state. All Michigan libraries and all Michigan residents can access these digital resources via the Michigan eLibrary (MeL), the Library of Michigan?s online home for digital resources.

?We are committed to helping existing Michigan businesses grow and thrive,? said Governor Rick Snyder, ?and in order for that to happen, they need to have targeted research databases which will assist in that growth. The Michigan eLibrary is the logical place to make these focused e-resources available to businesses growing to the next level, new businesses just starting up and to all Michiganders.?

?The Michigan eLibrary now has an expanded set of resources that Michigan business owners, and the organizations that support them, can use as they start up or advance their businesses to the next stage,? said Michigan State Librarian, Nancy Robertson. ?We are pleased to make these additional resources available to all Michigan residents through MeL, thanks to the state funding Governor Snyder recommended for inclusion in his executive budget.?

The business resources being provided by Gale will aid business researchers of all kinds including business school students, local entrepreneurs and small business owners, as well as others looking for access to global business intelligence. The online database resources being made available include:

  • DemographicsNow: Business & People ? which provides comprehensive business and demographic information for users to assess business viability, create sales leads and mailing lists, complete location analyses and business plans, analyze population trends, find potential sponsors and donors and more. This versatile database is useful for those who want to start a business as well as those who want to take their established business to the next level.
  • Gale LegalForms ? provides actual attorney forms and documents in Word format helping users to deal with their legal needs ? whether for business, personal or litigation purposes. Continuously updated to reflect current state laws, Gale LegalForms also includes a law digest, legal questions and answers and an attorney directory.
  • Business Insights: Global ? combines an international perspective and sophisticated research tools with convenient access to a range of comprehensive learning materials. Using case studies, statistical data sources, news articles, academic journals, and topical reference materials organized by country, company, and industry, this resource is especially useful to business faculty and students, as wells as to Michigan businesses interested in expansion.
  • Reference ebooks on a variety of business topics from Gale Virtual Reference Library are also available.

?Every month business owners and employees use resources at U.S. public libraries nearly 3 million times, and now Michigan businesses will have even more resources at their fingertips,? said Jim Draper, vice president and general manager, Gale. ?As a local Michigan organization ourselves, we?re excited to be able to help our local community and make these resources available.?

CIVICTechnologies, a leading provider of software and services for public and academic libraries based in Los Angeles, California, will provide BusinessDecision. BusinessDecision helps small businesses and entrepreneurs succeed by increasing their market share and growing their clientele. BusinessDecision offers professional level capabilities that combine the highest quality consumer market data such as the Tapestry lifestyle segmentation system, consumer spending data, demographic and housing data, population estimates, and forecasts using Census data with state of the art mapping technology.

?Small businesses are the economic engine of our nation, and libraries have a vital role in helping entrepreneurs and small businesses grow and succeed,? said Marc Futterman, president/CEO of CIVICTechnologies. ?Through this partnership with the Library of Michigan, libraries are helping their local communities be economically vibrant.?

For more information on Gale business resources, please visit www.gale.cengage.com. For more information on CIVICTechnologies, please visit www.civictechnologies.com. For more information on the Michigan eLibrary?s business resources, please visit www.mel.org/bizandjobs.

About Cengage Learning and Gale?

Cengage Learning is a leading educational content, software and services company, empowering educators and driving learner engagement through personalized services and course-driven digital solutions that bridge from the library to the classroom. Gale, part of Cengage Learning, serves the world?s information and education needs through its vast and dynamic content pools, which are used by students and consumers in their libraries, schools and on the Internet. It is best known for the accuracy, breadth and convenience of its data, addressing all types of information needs ? from homework help to health questions to business profiles ? in a variety of formats. For more information, visit www.cengage.com or www.gale.cengage.com.

About CIVICTechnologies

CIVICTechnologies provides a full suite of web services, customized applications and consulting services to meet the complete market research and analytical needs of libraries and businesses?from small and medium size enterprises to Fortune 500 companies?across a diverse range of industries. CIVICTechnologies enables its customers to visualize data in new and innovative ways in order to deliver more effective products and services, make better informed decisions, build consensus faster, allocate resources more wisely, and implement organization-wide solutions more effectively. For more information, call Marc Futterman toll free at (888) 606-7600 or email maf@civictechnologies.com; or visit www.civictechnologies.com.

About the Library of Michigan

The Library of Michigan?Michigan?s official state library agency for more than 175 years?is part of the Michigan Department of Education. The Michigan eLibrary is the Library of Michigan?s flagship program. To learn more, visit www.michigan.gov/libraryofmichigan

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Source: http://news.cengage.com/library-research/gale-the-library-of-michigan-and-civictechnologies-partner-to-make-business-resources-available-for-the-michigan-business-community/

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